许燕 博士
北京航空航天大学 生物与医学工程学院 教授
微软亚洲研究院 访问学者

Yan Xu, Ph.D. & Assistant Professor
Visiting Scholar, Microsoft Research Asian
Tel.@Fax: 86-10-82338755
Email: xuyan@buaa.edu.cn


主要教育、科研简历：
1997 –2001 四川大学、建筑与环境学院、工程力学专业 学士学位
2001 –2004 四川大学、生物医学工程专业、 硕士学位
2004 –2009 清华大学、生物医学工程专业、 博士学位
2007 –2008 美国爱荷华大学、计算机与电子工程系、 访问学生
2008 – 微软亚洲研究院、访问学者
2009 –2015 北京航空航天大学、讲师
2015 -     北京航空航天大学  副教授、教授
Education
2004-2009: Ph.D. Biomedical Engineering, Tsinghua University, China
2007-2008: Visiting Student, Electrical and Computer Engineering, University of Iowa, USA
2001-2004: M.S. Biomedical Engineering, Sichuan University, China
1997-2001: B.S. Engineering Mechanics, Sichuan University, China
Professional Experience
2009 –Present: Assistant Professor, School of Biological Science and Medical Engineering
Beihang University, CHINA
2008 –Present: Visiting Scholar, Microsoft Research Asia
主要研究方向:
1. 机器学习
2. 医学数据挖掘
3. 医学图像处理
4. 文本挖掘
machine learning，data mining，medical image processing,
Research Interests
1. Machine Learning
2. Medical Data Mining
3. Medical Imaging Processing
4. Text Mining
主要社会兼职:

Memberships of Professional Societies:
Member of Editorial Board:
主要学术荣誉:
国家自然科学面上项目（2010）


近期主要论著（Recent Publications Selected）:

https://scholar.google.com/citations?user=D01Xtx4AAAAJ&hl=zh-CN

1)   Yan Xu, Yining Wang, Tianren Liu, Junichi Tsujii, and Eric I-Chao Chang, An end-to-end system to identify temporal relation in discharge summaries: 2012 i2b2 challenge, in Journal of American Medical Informatics Association, BMJ Group, February 2013

2)   Yan Xu, Jianwen Zhang, Eric Chang, Maode Lai, and Zhuowen Tu, Contexts-Constrained Multiple Instance Learning for Histopathology Image Analysis (Oral), in International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), June 2012

3)   Yan Xu, Junichi Tsujii, and Eric Chang, Named entity recognition of follow-up and time information in 20,000 radiology reports, in Journal of the American Medical Informatics Association, 28 May 2012

4)   Yan Xu, Kai Hong, Junichi Tsujii, and Eric Chang, Feature engineering combined with machine learning and rule-based methods for structured information, in Journal of the American Medical Informatics Association, 14 May 2012

5)   Yan Xu, Jiahua Liu, Jiajun Wu, Yue Wang, Zhuowen Tu, Jian-Tao Sun, Junichi Tsujii, and Eric Chang, A classification approach to coreference in discharge summaries: 2011 i2b2 challenge, in Journal of the American Medical Informatics Association, 2012

6)   Yan Xu, Yue Wang, Jiahua Liu, Zhuowen Tu, Jian-Tao Sun, Junichi Tsujii, and Eric Chang, Suicide Note Sentiment Classification: A Supervised Approach Augmented by Web Data, in Biomedical Informatics Insights, Libertas Academica, January 2012

7)   Yan Xu, Jun-Yan Zhu, Eric Chang, and Zhuowen Tu, Multiple Clustered Instance Learning for Histopathology Cancer Image Classification, Segmentation and Clustering, in Computer Vision and Pattern Recognition (CVPR), 2012

8)   Yan Xu, Yue Wang, Jiahua Liu, and Eric Chang, Sentiment Analysis of Suicide Notes Based OnExternal Resources (Rank 2), in Proceedings of the 2011 i2b2/VA/Cincinnati Workshop on Challenges in Natural Language Processing for Clinical Data, 2011

9)   Yan Xu, Jiahua Liu, Jiajun Wu, Yue Wang, and Eric Chang, EHUATUO: A Mention-pair Coreference System by Exploiting Document Intrinsic Latent Structures and World Knowledge in Discharge Summaries (Rank 1), in Proceedings of the 2011 i2b2/VA/Cincinnati Workshop on Challenges in Natural Language Processing for Clinical Data, 2011

10) Eric Chang, Yan Xu, Kai Hong, Jianqiang Dong, and Zhaoquan Gu, A Hybrid Approach to Extract Structured Information from Narrative Clinical Discharge Summaries, in Proceedings of the 2010 i2b2/VA/Cincinnati Workshop on Challenges in Natural Language Processing for Clinical Data, October 2010
Saha PK, Xu Y, Liang GY. Volumetric Topological Analysis: A Novel Method for Trabecular Bone Characterization on the Continuum between Plates and Rods. IEEE Transactions on Medical Image, 2010

11) Xu Y, Saha PK, Hu GS. 3D CTA coronary artery analysis based on Fuzzy Distance Transform. JTsinghua Univ(Sci&Tech).2010

12) Xu Y, Saha PK, Hu GS, Yang Y, Geng JZ. Quantification of Stenosis in Coronary Artery via CTA Using Fuzzy Distance Transform. SPIE conference, Orlando USA, 2009

13) Saha PK, Xu Y, Liang GY. Volumetric Topological Analysis: A Novel Method for Trabecular Bone Characterization on the Continuum between A Prefect Plate and a Rod. SPIE conference, Orlando USA, 2009

14) Xu Y, Zhang H, Li H, Hu GS.An Improved Algorithm for Vessel Centerline Tracking in Coronary Angiograms.Computer Methods and Programs Biomedicine. 2007, 88(2):131-143

15) Xu Y, Xue H, Hu GS,. Main Algorithms of Coronary Blood Flow and Velocity based on Angiographic Images.International Biomedical Engineering.2008,26(6):874-878

16) Xu Y, Xue H, Hu GS, Diameter Measurements of Coronary Artery Segments based on Image Analysis of X-ray Angiograms,Chinese Journal of Biomedical Engineering.2007, 26(6):874-878

17) Xu Y, Xue H, Hu GS, Luman Diameter of Human Coronary Arteries:Influence of sex,age, height,weight. angiograms,Chinese Journal of Biomedical Engineering .2008,31(3):155-158

18) Xu Y, Xue H, Hu GS, Research of major Coronary Artery Parameter using Image Analysis in x-ray angiograms.JTsinghua Univ(Sci&Tech). 2008, 48(3):430-434
Xu Y, Hu GS, Geng JZ, Shang LH, Automated Coronary Arterial Tree Extraction using Pallel and Topology. Angiograms. Chinese Journal of Biomedical Engineering, 2007, 26(1): 24-29

19) Xu Y, Hu GS, Shang LH, Geng JZ. Adaptive tracking extraction of vessel centerline using Hessian matrix in coronary arteriograms. J Tsinghua Univ(Sci&Tech),2007,47(6):889-892

20) Xu Y, Hu GS, Geng JZ, Shang LH. Automated coronary arterial tree extraction using parallel and topology. Chinese Journal of Biomedical engineering,2007,26(1):24-29

21) Xu Y, Hu GS, Geng JZ, Shang LH. Automated coronary arterial tree extraction using morphological and dynamic programming segmentation. J Tsinghua Univ(Sci&Tech),2006,46(12):2061-2064,2076

22) Xu Y, Fan YB, Yu XJ. Body-surface trauma image segmentation. J Sichuan Univ,2005,37(5):41-45

23) Xu Y, Fan YB, Yu XJ. Researches in forensic biomechanics. J Biomed Eng, 2004,21(1):141-145

联系方式:
地址：北京、北京航空航天大学、生物与医学工程学院
邮编：100191
电话&传真：(8610)82338755
电子邮件： xuyan@buaa.edu.cn

Contact Information:
Address: School of Biological Science and Medical Engineering, Beihang University
XueYuan Road No.37, HaiDian District, Beijing, 100191, China
Tel & Fax: (8610)82338755
Email: xuyan@buaa.edu.cn